BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A10LP1|AL430334
(642 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 241 1e-63
3x_Contig1586 212 7e-55
3x_Contig1183 104 2e-22
3x_Contig866 100 4e-21
>3x_Contig1362
Length = 8864
Score = 241 bits (116), Expect = 1e-63
Identities = 227/271 (83%), Gaps = 6/271 (2%)
Strand = Plus / Plus
Query: 7 gagaaatcagaagattccaaaaatctactgaacttttgatcagaaagttgccattccaaa 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5470 gagaaatcagaagattccaaaaatctactgaacttttgatcagaaagttgccattccaaa 5529
Query: 67 gaktgggcgagrgragaktgctcaagakttcaagrgckggackggrgrttccrrgkcttc 126
|| ||| | || | | | ||||||||| |||||| | ||| | | |||| ||||
Sbjct: 5530 gattggtc-agagaa-attgctcaagatttcaaga-ct-gacttgagattccaa-tcttc 5584
Query: 127 kgcgatcggtgctttgcragwwtccgtcgtagcctasttggtctctttgttcggggggct 186
|||||||||||||||| || ||||||| |||||| ||||||||||||||| | | |
Sbjct: 5585 tgcgatcggtgctttgcaagaatccgtcgaagcctacttggtctctttgttc-gaagaca 5643
Query: 187 ctaacttggctgttatttatgctaagagagtnantatcsaaaagaaggacatgaagttgg 246
|||||||||||| ||| | ||||||||||| | |||| ||||||||||||| |||||||
Sbjct: 5644 ctaacttggctgctatccacgctaagagagtcactatccaaaagaaggacatcaagttgg 5703
Query: 247 nnanaagantaagaggtgaaagatnttaatt 277
| |||| ||||||||||||||| ||||||
Sbjct: 5704 ccagaagactaagaggtgaaagatcttaatt 5734
Score = 224 bits (108), Expect = 1e-58
Identities = 111/114 (97%)
Strand = Plus / Plus
Query: 504 aaggttatttcattgaaaaattgaactatcaaacatcagtttactaatcatttacttggg 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5948 aaggttatttcattgaaaaattgaactatcaaacatcagtttactaatcatttacttggg 6007
Query: 564 trctctgagcgagctamcctcttgcgaaatctactgtgatgctcgttaaartgt 617
| |||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 6008 tactctgagcgagctaccctcttgcgaaatctactgtgatgctcgttaaagtgt 6061
>3x_Contig1586
Length = 12315
Score = 212 bits (102), Expect = 7e-55
Identities = 225/273 (82%), Gaps = 6/273 (2%)
Strand = Plus / Plus
Query: 7 gagaaatcagaagattccaaaaatctactgaacttttgatcagaaagttgccattccaaa 66
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10719 gagaaattagaagattccaaaaatctactgaacttttgatcagaaagttgccattccaaa 10778
Query: 67 gaktgggcgagrgragaktgctcaagakttcaagrgckggackggrgrttccrrgkcttc 126
|| ||| | || | | | ||||||||| |||||| | ||| | | |||| ||||
Sbjct: 10779 gattggtc-agagaa-attgctcaagatttcaaga-ct-gacttgagattccaa-tcttc 10833
Query: 127 kgcgatcggtgctttgcragwwtccgtcgtagcctasttggtctctttgttcggggggct 186
|| ||||||||||||| | ||||||| |||||| ||||||||||||||| | | |
Sbjct: 10834 tgctatcggtgctttgcaggaatccgtcgaagcctacttggtctctttgttc-gaagaca 10892
Query: 187 ctaacttggctgttatttatgctaagagagtnantatcsaaaagaaggacatgaagttgg 246
|||||||||||| |||| ||||||||||||| | ||| ||||||||||||| |||||||
Sbjct: 10893 ctaacttggctgctattcatgctaagagagtcactattcaaaagaaggacatcaagttgg 10952
Query: 247 nnanaagantaagaggtgaaagatnttaatttt 279
| |||| | ||||||||||||| |||||||
Sbjct: 10953 ctagaagattgagaggtgaaagatcataatttt 10985
>3x_Contig1183
Length = 3176
Score = 104 bits (50), Expect = 2e-22
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 276 tttttttyttttyytytttttttttttgttttytttttttttwwgtttytttcttccyct 335
||||||| |||| | ||||||||||| |||| ||||||||| |||| ||| || |
Sbjct: 516 ttttttttttttttttttttttttttttttttttttttttttttgttttttttttttttt 457
Query: 336 tttttttytttyyttttttttttttattttkttttttttt 375
||||||| ||| |||||||||||| |||| |||||||||
Sbjct: 456 tttttttttttttttttttttttttttttttttttttttt 417
Score = 104 bits (50), Expect = 2e-22
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 276 tttttttyttttyytytttttttttttgttttytttttttttwwgtttytttcttccyct 335
||||||| |||| | ||||||||||| |||| ||||||||| ||| ||| || |
Sbjct: 201 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 142
Query: 336 tttttttytttyyttttttttttttattttkttttttttt 375
||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 141 tttttttttttttttttttttttttatttttttttttttt 102
>3x_Contig866
Length = 4028
Score = 100 bits (48), Expect = 4e-21
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 276 tttttttyttttyytytttttttttttgttttytttttttttwwgtttytttcttccyct 335
||||||| |||| | ||||||||||| |||| ||||||||| |||| ||| || |
Sbjct: 250 ttttttttttttttttttttttttttttttttttttttttttttgttttttttttttttt 191
Query: 336 tttttttytttyyttttttttttttattttkttttttt 373
||||||| ||| |||||||||||| |||| |||||||
Sbjct: 190 tttttttttttttttttttttttttttttttttttttt 153
Score = 100 bits (48), Expect = 4e-21
Identities = 84/105 (80%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 276 tttttttyttttyytytttttttttttgttttytttttttttwwgtttytttcttccyct 335
||||||| |||| | |||||||||||||||| ||||||||| ||| ||| || |
Sbjct: 233 tttttttttttttttttttttttttttgttttttttttttttttttttttttttt----t 178
Query: 336 tttttttytttyyttttttttttttattttktttttttttkktat 380
||||||| ||| |||||||||||| |||| ||||||||| |||
Sbjct: 177 tttttttttttttttttttttttttgtttttttttttttttttat 133
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,102
Number of Sequences: 1807
Number of extensions: 14102
Number of successful extensions: 4404
Number of sequences better than 1.0e-20: 4
length of query: 642
length of database: 10,358,551
effective HSP length: 16
effective length of query: 626
effective length of database: 10,329,639
effective search space: 6466354014
effective search space used: 6466354014
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.2 bits)